Merge pull request #27 from jdossgollin/quarto

Move to Quarto

.github/workflows/publish-quarto.yml

@@ -0,0 +1,46 @@
+on:
+  repository_dispatch:
+  push:
+    branches: [master]
+
+name: Render and Publish
+
+# you need these permissions to publish to GitHub pages
+permissions:
+  contents: write
+  pages: write
+
+# https://github.com/marketplace/actions/setup-miniconda
+defaults:
+      run:
+        shell: bash -l {0}
+
+jobs:
+  build-deploy:
+    runs-on: ubuntu-latest
+
+    # run only on upstream, not on downstream
+    if: github.repository == 'dossgollin-lab/lab-guide'
+
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+        with:
+          submodules: true
+
+      - name: Set up Quarto
+        uses: quarto-dev/quarto-actions/setup@v2
+
+      - name: Update bibliography
+        run: |
+          cd _bibliography
+          git branch -u origin/master master
+          cd ..
+          git submodule update --remote --recursive
+
+      - name: Publish to GitHub Pages (and render)
+        uses: quarto-dev/quarto-actions/publish@v2
+        with:
+          target: gh-pages
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # this secret is always available for github actions

.gitignore

@@ -1,3 +1,7 @@
 site/
 _site/
 .jekyll-cache
+
+/.quarto/
+*.html
+*.pdf

.gitmodules

@@ -0,0 +1,3 @@
+[submodule "_bibliography"]
+	path = _bibliography
+	url = https://github.com/jdossgollin/my-papers.git