Dependencies

Quantum Clustering

• NumPy
• SciKit-Learn
• bitstring

GPU SL

• Numpy
• Numba
• NumbaPro (only for Single-Link)

EAC

• Numpy
• Numba
• SciPy
• scipy_numba (included in repo)
• PyTables (for very large sparse matrices)

Usage

Make sure scipy_numba and this repository are in the PYTHONPATH, so that the code is availale from anywhere.

TODO

Dev

• Float support in GPU Scan

Tests

• scan (DONE)
• EAC
• Boruvka CPU
• Boruvka GPU
• SL CPU
• SL GPU
• graph build
• graph mst
• graph connected components