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WIP: replace calc-weighted-overlap with mgmanysearch #19

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WIP: replace calc-weighted-overlap with mgmanysearch #19

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@ctb ctb commented Feb 6, 2024 •
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This PR replaces the bespoke script calc-weighted-overlap with mgmanysearch from https://github.com/sourmash-bio/sourmash_plugin_containment_search/.

TODO:

  • inspect results :)
  • consider replacing k-mer containment output with ANI, or augmenting by adding an ANI graph

@ctb ctb mentioned this pull request Feb 20, 2024
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