Merge pull request #41 from dave3d/SpellingBugs

Spelling bugs

environment.yml

@@ -9,7 +9,8 @@ channels:
 dependencies:
   - simpleitk
   - numpy
+  - pip
   - pip:
     - pydicom
     - vtk
-    - -e git+https://github.com/SimpleITK/SimpleITKUtilities.git#egg=SimpleITKUtilities
+    - git+https://github.com/SimpleITK/SimpleITKUtilities.git@main

examples/gui.py

@@ -532,7 +532,7 @@ def create_ui(self, shared_slider,wl_range, wl_init):
     def get_window_level_numpy_array(self, image_list, window_level_list, intensity_slider_range_percentile):
         # Using GetArray and not GetArrayView because we don't keep references
         # to the original images. If they are deleted outside the view would become
-        # invalid, so we use a copy wich guarentees that the gui is consistent.
+        # invalid, so we use a copy which guarantees that the gui is consistent.
         npa_list = list(map(sitk.GetArrayFromImage, image_list))
 
         wl_range = []
@@ -628,7 +628,7 @@ def __init__(self, image, window_level= None, figure_size=(10,8)):
         self.roi_selector.set_visible(False)
 
         # Display the data and the controls, first time we display the image is outside the "update_display" method
-        # as that method relies on the existance of a previous image which is removed from the figure.
+        # as that method relies on the existence of a previous image which is removed from the figure.
         self.axes.imshow(self.npa[self.slice_slider.value,:,:] if self.slice_slider else self.npa,
                          cmap=plt.cm.Greys_r,
                          vmin=self.min_intensity,
@@ -843,7 +843,7 @@ def __init__(self, transform=sitk.Euler2DTransform(), data_scale=100.0, figure_s
         self.fixed_fiducials = []
         self.fixed_targets = []
         # The moving fiducials will have noise, bias added to their coordinates. Noise
-        # model is zero mean Gaussian, isotropic and homogenous.
+        # model is zero mean Gaussian, isotropic and homogeneous.
         self.moving_fiducials = []
         self.moving_targets = []
         # This list will contain the FLE vectors, not the FLE. Allows us to

examples/myshow.py

@@ -34,7 +34,7 @@ def myshow(img, title=None, margin=0.05, dpi=80):
         ysize = nda.shape[0]
         xsize = nda.shape[1]
 
-    # Make a figure big enough to accomodate an axis of xpixels by ypixels
+    # Make a figure big enough to accommodate an axis of xpixels by ypixels
     # as well as the ticklabels, etc...
     figsize = (1 + margin) * ysize / dpi, (1 + margin) * xsize / dpi
 

tests/write_series.py

@@ -26,7 +26,7 @@ def writeSlices(series_tag_values, new_img, out_dir, writer, i):
     # Slice specific tags.
     #   Instance Creation Date
     image_slice.SetMetaData("0008|0012", time.strftime("%Y%m%d"))
-    #   Instace Creation Time
+    #   Instance Creation Time
     image_slice.SetMetaData("0008|0013", time.strftime("%H%M%S"))
 
     # Setting the type to CT preserves the slice location.