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Pinned

  1. DIVES DIVES Public

    Deep Interactive Viral Embedding for Subtyping of HIV-1 polymerase (pol) sequences

    Python 1

  2. CDCgov/SeqRuler CDCgov/SeqRuler Public

    GUI for calculating TN93 or SNP distances for a set of sequences.

    Java 1 1

  3. mcem mcem Public

    monte carlo entropy minimization for phylogenetic trees

    Python

  4. structured_embedding structured_embedding Public

    Project to enforce predefined geometric structure on the embedding space of HIV sequences to aid in subtyping.

    Python

  5. sphere sphere Public

    Forked from Sergey-Knyazev/spy

    Java

  6. seqpred seqpred Public

    Python