Add a sub-package "time series" into PlantCV #587
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DannieSheng
added
documentation
for the newly added time_lapse_video function into visualize subpackage
for the newly added time_lapse_video into visualize subpackage
for the newly added time_lapse_video into visualize subpackage
Update tests for visualize/time_lapse_video
8 tasks
- remove unused methods; - change from `get_uid` to `get_sorted_uids`; - change from `get_emergence` to `get_emerg_disap_info`; - update `get_ti` method - add static method `update_ti` that is used to update time-series tracking by comparing timepoints whose distance is greater than 1.
…ngs for multiple methods
…d when `update_ti` is called
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Describe your changes
A brand new sub-package called "time series" was added to PlantCV.
This package is different from most functions already in PlantCV, it deals not with single images, but a series of images. Related documentation, tests, and test data are also updated.
class
InstanceTimeSeriesLinking(methods are called by the methods inside the parentheses )
(checklist for whether have tests covered)
class methods:
save_linked_seriesimport_linked_serieslink_t(link)linkupdate_tilink_dist_t(link_dist)link_diststatic methods:
get_link(_update_ti,link_t,link_dist_t)compute_overlaps_weights(link_t,_update_ti)get_sorted_uids(link,link_dist)get_uids_from_ti(_update_ti)get_emerg_disap_info(get_ti,_update_ti)get_ti(link,link_dist)get_li_from_tiarea_tracking_report(link,update_ti)visualize_update_ti(update_ti)compute_dist_weights(link_dist_t)Type of update
Is this a: