Update via Issue Milestone Collector

cov-lineages · Apr 25, 2024 · 90cbcb6 · 90cbcb6
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diff --git a/scripts/issue-milestone-collector/README.md b/scripts/issue-milestone-collector/README.md
@@ -297,7 +297,7 @@ PANGO | UNALIASED PANGO | MILESTONE | ISSUE | LABELS | REPO
 `KP.2` | `B.1.1.529.2.86.1.1.11.1 .2` | [⚑ 425](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/425?closed=1) | [#1089 🔵](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1089) | [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [S:346](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A346), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated), [JN.1](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1), [FLiRT](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLiRT) | 2nd
 `KP.2.1` | `B.1.1.529.2.86.1.1.11.1 .2.1` | [⚑ 439](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/439?closed=1) | [#1440](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1440) | [Emerged in an undersampled area](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Emerged%20in%20an%20undersampled%20area), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [Double Nuc mutations](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Double%20Nuc%20mutations), [S:1104](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A1104), [s:1201](https://github.com/sars-cov-2-variants/lineage-proposals/labels/s%3A1201), [FLiRT](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLiRT) | 2nd
 `KP.2.2` | `B.1.1.529.2.86.1.1.11.1 .2.2` | [⚑ 438](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/438?closed=1) | [#1446](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1446) | [Rapid review needed](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Rapid%20review%20needed), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:59](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A59), [FLiRT](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLiRT), [s:1266](https://github.com/sars-cov-2-variants/lineage-proposals/labels/s%3A1266) | 2nd
-`KP.2.3` | `B.1.1.529.2.86.1.1.11.1 .2.3` | [⚑ 455](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/455?closed=1) | [#1459 🟠](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1459) | [Deletions/Truncations/Frameshifted](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Deletions%2FTruncations%2FFrameshifted), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated), [N Glycan](https://github.com/sars-cov-2-variants/lineage-proposals/labels/N%20Glycan), [S:146](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A146), [KP.2](https://github.com/sars-cov-2-variants/lineage-proposals/labels/KP%2E2), [DeFlirt](https://github.com/sars-cov-2-variants/lineage-proposals/labels/DeFlirt) | 2nd
+`KP.2.3` | `B.1.1.529.2.86.1.1.11.1 .2.3` | [⚑ 455](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/455?closed=1) | [#1459 🟠](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1459) | [To be proposed](https://github.com/sars-cov-2-variants/lineage-proposals/labels/To%20be%20proposed), [Deletions/Truncations/Frameshifted](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Deletions%2FTruncations%2FFrameshifted), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated), [N Glycan](https://github.com/sars-cov-2-variants/lineage-proposals/labels/N%20Glycan), [S:146](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A146), [KP.2](https://github.com/sars-cov-2-variants/lineage-proposals/labels/KP%2E2), [DeFlirt](https://github.com/sars-cov-2-variants/lineage-proposals/labels/DeFlirt) | 2nd
 `KP.3` | `B.1.1.529.2.86.1.1.11.1 .3` | [⚑ 434](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/434?closed=1) | [#1410](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1410) | [S:456](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A456), [Emerged in an undersampled area](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Emerged%20in%20an%20undersampled%20area), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:493](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A493), [JN.1](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1), [S:1104](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A1104) | 2nd
 `KP.4.1` | `B.1.1.529.2.86.1.1.11.1 .4.1` | [⚑ 425](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/425?closed=1) | [#1089 🔵](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1089) | [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [S:346](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A346), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated), [JN.1](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1), [FLiRT](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLiRT) | 2nd
 `KP.4.2` | `B.1.1.529.2.86.1.1.11.1 .4.2` | [⚑ 425](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/425?closed=1) | [#1089 🔵](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1089) | [Multiple lineages](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Multiple%20lineages), [S:346](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A346), [partially designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/partially%20designated), [JN.1](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1), [FLiRT](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLiRT) | 2nd
@@ -1399,7 +1399,7 @@ PANGO | UNALIASED PANGO | MILESTONE | ISSUE | LABELS | REPO
 `XDH` | `XDH` | [⚑ 284](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/284?closed=1) | [#128](https://github.com/sars-cov-2-variants/lineage-proposals/issues/128) | [recombinant](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant), [Emerged in an undersampled area](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Emerged%20in%20an%20undersampled%20area), [High local prevalence](https://github.com/sars-cov-2-variants/lineage-proposals/labels/High%20local%20prevalence), [XDH](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDH) | 2nd
 `XDJ` | `XDJ` | [⚑ 285](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/285?closed=1) | [#997](https://github.com/sars-cov-2-variants/lineage-proposals/issues/997) | [recombinant](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:52](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A52), [FLip](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLip), [s:157](https://github.com/sars-cov-2-variants/lineage-proposals/labels/s%3A157), [XDJ](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDJ) | 2nd
 `XDK` | `XDK` | [⚑ 371](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/371?closed=1) | [#1126](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1126) | [recombinant](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [BA.2.86](https://github.com/sars-cov-2-variants/lineage-proposals/labels/BA%2E2%2E86), [S:572](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A572), [JN.1](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1), [XDK](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDK) | 2nd
-`XDK.1` | `XDK.1` | [⚑ 423](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/423?closed=1) | [#1407 🔵](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1407) | [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [XDK](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDK), [JN.1 Spike](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1%20Spike), [Convergent Trio 346/456/572](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Convergent%20Trio%20346%2F456%2F572) | 2nd
+`XDK.1` | `XDK.1` | [⚑ 423](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/423?closed=1) | [#1407 🔵](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1407) | [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [S:475](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A475), [XDK](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDK), [JN.1 Spike](https://github.com/sars-cov-2-variants/lineage-proposals/labels/JN%2E1%20Spike), [Convergent Trio 346/456/572](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Convergent%20Trio%20346%2F456%2F572) | 2nd
 `XDL` | `XDL` | [⚑ 827](https://github.com/cov-lineages/pango-designation/milestone/827?closed=1) | [#2351](https://github.com/cov-lineages/pango-designation/issues/2351) |  | main
 `XDL` | `XDL` | [⚑ 379](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/379?closed=1) | [#914](https://github.com/sars-cov-2-variants/lineage-proposals/issues/914) | [recombinant](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [FLip](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLip) | 2nd
 `XDM` | `XDM` | [⚑ 393](https://github.com/sars-cov-2-variants/lineage-proposals/milestone/393?closed=1) | [#1163](https://github.com/sars-cov-2-variants/lineage-proposals/issues/1163) | [recombinant](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant), [Rapid review needed](https://github.com/sars-cov-2-variants/lineage-proposals/labels/Rapid%20review%20needed), [S:478](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A478), [designated](https://github.com/sars-cov-2-variants/lineage-proposals/labels/designated), [FLip](https://github.com/sars-cov-2-variants/lineage-proposals/labels/FLip), [s:182](https://github.com/sars-cov-2-variants/lineage-proposals/labels/s%3A182), [554k](https://github.com/sars-cov-2-variants/lineage-proposals/labels/554k), [recombinant squared](https://github.com/sars-cov-2-variants/lineage-proposals/labels/recombinant%20squared), [S:180](https://github.com/sars-cov-2-variants/lineage-proposals/labels/S%3A180), [XDM](https://github.com/sars-cov-2-variants/lineage-proposals/labels/XDM) | 2nd

diff --git a/scripts/issue-milestone-collector/data/mappings.json b/scripts/issue-milestone-collector/data/mappings.json
@@ -3551,7 +3551,7 @@
       "repo": "sars-cov-2-variants/lineage-proposals",
       "milestone": 455,
       "issue": 1459,
-      "labels": "Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt",
+      "labels": "To be proposed, Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt",
       "state": "OPEN",
       "reason": null,
       "unaliased": "B.1.1.529.2.86.1.1.11.1.2.3"
@@ -16665,7 +16665,7 @@
       "repo": "sars-cov-2-variants/lineage-proposals",
       "milestone": 423,
       "issue": 1407,
-      "labels": "designated, XDK, JN.1 Spike, Convergent Trio 346/456/572",
+      "labels": "designated, S:475, XDK, JN.1 Spike, Convergent Trio 346/456/572",
       "state": "OPEN",
       "reason": "REOPENED",
       "unaliased": "XDK.1"

diff --git a/scripts/issue-milestone-collector/data/mappings.tsv b/scripts/issue-milestone-collector/data/mappings.tsv
@@ -296,7 +296,7 @@ KP.1.2	sars-cov-2-variants/lineage-proposals	389	1097	To be proposed, Multiple l
 KP.2	sars-cov-2-variants/lineage-proposals	425	1089	Multiple lineages, S:346, partially designated, JN.1, FLiRT	OPEN	REOPENED	B.1.1.529.2.86.1.1.11.1.2
 KP.2.1	sars-cov-2-variants/lineage-proposals	439	1440	Emerged in an undersampled area, designated, Double Nuc mutations, S:1104, s:1201, FLiRT	CLOSED	COMPLETED	B.1.1.529.2.86.1.1.11.1.2.1
 KP.2.2	sars-cov-2-variants/lineage-proposals	438	1446	Rapid review needed, designated, S:59, FLiRT, s:1266	CLOSED	COMPLETED	B.1.1.529.2.86.1.1.11.1.2.2
-KP.2.3	sars-cov-2-variants/lineage-proposals	455	1459	Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt	OPEN		B.1.1.529.2.86.1.1.11.1.2.3
+KP.2.3	sars-cov-2-variants/lineage-proposals	455	1459	To be proposed, Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt	OPEN		B.1.1.529.2.86.1.1.11.1.2.3
 KP.3	sars-cov-2-variants/lineage-proposals	434	1410	S:456, Emerged in an undersampled area, designated, S:493, JN.1, S:1104	CLOSED	COMPLETED	B.1.1.529.2.86.1.1.11.1.3
 KP.4.1	sars-cov-2-variants/lineage-proposals	425	1089	Multiple lineages, S:346, partially designated, JN.1, FLiRT	OPEN	REOPENED	B.1.1.529.2.86.1.1.11.1.4.1
 KP.4.2	sars-cov-2-variants/lineage-proposals	425	1089	Multiple lineages, S:346, partially designated, JN.1, FLiRT	OPEN	REOPENED	B.1.1.529.2.86.1.1.11.1.4.2
@@ -1398,7 +1398,7 @@ XDG	sars-cov-2-variants/lineage-proposals	246	770	recombinant, S:456, Multiple l
 XDH	sars-cov-2-variants/lineage-proposals	284	128	recombinant, Emerged in an undersampled area, High local prevalence, XDH	CLOSED	COMPLETED	XDH
 XDJ	sars-cov-2-variants/lineage-proposals	285	997	recombinant, designated, S:52, FLip, s:157, XDJ	CLOSED	COMPLETED	XDJ
 XDK	sars-cov-2-variants/lineage-proposals	371	1126	recombinant, designated, BA.2.86, S:572, JN.1, XDK	CLOSED	COMPLETED	XDK
-XDK.1	sars-cov-2-variants/lineage-proposals	423	1407	designated, XDK, JN.1 Spike, Convergent Trio 346/456/572	OPEN	REOPENED	XDK.1
+XDK.1	sars-cov-2-variants/lineage-proposals	423	1407	designated, S:475, XDK, JN.1 Spike, Convergent Trio 346/456/572	OPEN	REOPENED	XDK.1
 XDL	cov-lineages/pango-designation	827	2351		CLOSED	COMPLETED	XDL
 XDL	sars-cov-2-variants/lineage-proposals	379	914	recombinant, designated, FLip	CLOSED	COMPLETED	XDL
 XDM	sars-cov-2-variants/lineage-proposals	393	1163	recombinant, Rapid review needed, S:478, designated, FLip, s:182, 554k, recombinant squared, S:180, XDM	CLOSED	COMPLETED	XDM

diff --git a/...-milestone-collector/github-artifacts/mappings/sars-cov-2-variants_lineage-proposals.json b/...-milestone-collector/github-artifacts/mappings/sars-cov-2-variants_lineage-proposals.json
@@ -5021,7 +5021,7 @@
       "repo": "sars-cov-2-variants/lineage-proposals",
       "milestone": 423,
       "issue": 1407,
-      "labels": "designated, XDK, JN.1 Spike, Convergent Trio 346/456/572",
+      "labels": "designated, S:475, XDK, JN.1 Spike, Convergent Trio 346/456/572",
       "state": "OPEN",
       "reason": "REOPENED"
     }
@@ -5626,7 +5626,7 @@
       "repo": "sars-cov-2-variants/lineage-proposals",
       "milestone": 455,
       "issue": 1459,
-      "labels": "Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt",
+      "labels": "To be proposed, Deletions/Truncations/Frameshifted, partially designated, N Glycan, S:146, KP.2, DeFlirt",
       "state": "OPEN",
       "reason": null
     }