Adding pango lineage B.1.526 to designation list 124 new sequences, m…

…ajoritively from NY-USA

lineage_notes.txt

@@ -924,6 +924,8 @@ B.1.521	USA lineage (TX)
 B.1.523	Reassigned from B.1.160, which split in the tree. Turkey, Saudi_Arabia and European lineage.
 B.1.524	Malaysian lineage
 B.1.525	Nigerian, Ghanaian and international lineage with E484K, del69-70 among other defining mutations.
+B.1.526	A lineage predominantly circulating in New York but with a few exports to other countries. Characterised by spike mutations T95I and D253G, plus others.
+The most frequent spike mutation pattern is L5F T95I D253G E484K D614G A701V, with a smaller fraction having S477N instead of E484K
 *B.2.1	Reassigned to B.40
 *B.2.6	Reassigned to B.35
 *B.2.10	Reassigned to B.41

lineages.csv

@@ -124005,10 +124005,6 @@ Russia/ROS-RII-MH3425S/2020,B.1.412
 Russia/SVE-RII-MH1443S/2020,B.1.412
 Singapore/1104/2020,B.1.412
 Russia/SPE-RII-MH998S/2020,B.1.412
-USA/NY-NYCPHL-001443/2020,B.1
-USA/NY-Wadsworth-290339-01/2020,B.1
-USA/NY-Wadsworth-290357-01/2020,B.1
-USA/NY-Wadsworth-290403-01/2020,B.1
 USA/NY-NYCPHL-001165/2020,B.1
 USA/CA-CZB-13785/2020,B.1
 USA/CA-CZB-1130/2020,B.1
@@ -174982,3 +174978,127 @@ Denmark/DCGC-41773/2021,B.1.525
 Denmark/DCGC-41839/2021,B.1.525
 Denmark/DCGC-41865/2021,B.1.525
 Denmark/DCGC-41879/2021,B.1.525
+USA/NY-NYCPHL-001443/2020,B.1.526
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