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Shiny apps

A single repo for all of the shiny apps.

meta-app

New version of the meta-analysis app. Faster and with a less bloated ui

geo-meta-app (old)

Exploring the meta-analysis results from the geo RNA-seq project.

geo-samples-app

Exploring the per-sample expression data from the geo RNA-seq project.

geuv-browser

The Coriell GEUVADIS expression browser.

inverse regression

An app to simulate regression and applying inverse regression on methylation aging data

norm-comparator

Compare normalization methods in RNA-seq data.

methylation-simulator

Simulate JSD and other methylation summary statistics

methylation-simulation

A poorly named app that simulates linear changes in methylation as a function of age and produces allele level data

clonal expansion

Smulate population-level changes in methylation

t-test power simulation

Simulate t-tests for methylation values. Used to estimate power and sample sizes for the most simple case of a two sample t-test.

tcga-pancan

An app to explore TCGA PanCancer data similar to CCLE data explorer.

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