Fix missing symbol in sql-py on osx-arm64

[DimitrisStaratzis]

Checklist

• Used a personal fork of the feedstock to propose changes
• Bumped the build number (if the version is unchanged)
• Reset the build number to 0 (if the version changed)
• Re-rendered with the latest conda-smithy (Use the phrase @conda-forge-admin, please rerender in a comment in this PR for automated rerendering)
• Ensured the license file is being packaged.

[conda-forge-webservices]

Hi! This is the friendly automated conda-forge-linting service.

I just wanted to let you know that I linted all conda-recipes in your PR (recipe) and found it was in an excellent condition.

[jdblischak]

What is the motivation for this PR? The CI on the latest commit, b9106fa, passed

[DimitrisStaratzis]

What is the motivation for this PR? The CI on the latest commit, b9106fa, passed

There was a reported issue for Missing symbol in sql-py on osx-arm64.

I tried the updated package on osx-arm64 and got the following:

In [2]: import numpy as np, tiledb

In [3]: tiledb.from_numpy("/tmp/bar3", np.random.rand(4))
Out[3]: DenseArray(uri='/tmp/bar3', mode=r, ndim=1)

In [4]: import tiledb.sql, pandas
   ...:
   ...: db = tiledb.sql.connect()
   ...: pandas.read_sql(sql="select * from `/tmp/bar3`", con=db)
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
Cell In[4], line 1
----> 1 import tiledb.sql, pandas
      3 db = tiledb.sql.connect()
      4 pandas.read_sql(sql="select * from `/tmp/bar3`", con=db)

File ~/opt/conda/envs/tmp/lib/python3.11/site-packages/tiledb/sql/__init__.py:22
     19 apilevel = "2.0"
     20 paramstyle = "format"
---> 22 from ._mysql import (
     23     NotSupportedError,
     24     OperationalError,
     25     get_client_info,
     26     ProgrammingError,
     27     Error,
     28     InterfaceError,
     29     debug,
     30     IntegrityError,
     31     string_literal,
     32     MySQLError,
     33     DataError,
     34     escape,
     35     escape_string,
     36     DatabaseError,
     37     InternalError,
     38     Warning,
     39     server_init,
     40     server_end,
     41 )
     42 from tiledb.sql.constants import FIELD_TYPE
     43 from tiledb.sql.times import (
     44     Date,
     45     Time,
   (...)
     49     TimestampFromTicks,
     50 )

ImportError: dlopen(/Users/inorton/opt/conda/envs/tmp/lib/python3.11/site-packages/tiledb/sql/_mysql.cpython-311-darwin.so, 0x0002): symbol not found in flat namespace '_mysql_affected_rows'

In [5]:
Do you really want to exit ([y]/n)?

/tmp/cf 1m 19s
tmp ❯ mamba list tiledb
# packages in environment at /Users/inorton/opt/conda/envs/tmp:
#
# Name                    Version                   Build  Channel
libtiledb-sql             0.27.1               ha40b254_0    conda-forge
libtiledb-sql-py          2.1.3           py311hcc98501_3    conda-forge
tiledb                    2.19.1               h49d9ff7_0    conda-forge
tiledb-cloud              0.11.1.dev5+g9e4eb5de          pypi_0    pypi
tiledb-plot-widget        1.1.0                    pypi_0    pypi
tiledb-py                 0.25.0          py311h32a2bd2_1    conda-forge

/tmp/cf

[DimitrisStaratzis]

@conda-forge-admin, please rerender

[github-actions]

Hi! This is the friendly automated conda-forge-webservice.

I tried to rerender for you, but it looks like there was nothing to do.

This message was generated by GitHub actions workflow run https://github.com/conda-forge/libtiledb-sql-py-feedstock/actions/runs/8349073842.

[DimitrisStaratzis]

suppressed by #29