Galaxy tools for applying Competitive Fragmentation Modeling (CFM) to spectrum prediction and metabolite identification tasks, as well as a tools for fragment generation and peak annotation.
The CFM-ID tool depends on a model. Trained models and invormation are available at https://sourceforge.net/p/cfm-id/code/HEAD/tree/supplementary_material/trained_models/esi_msms_models/.
Website: http://cfmid.wishartlab.com/
Source code: https://sourceforge.net/p/cfm-id/wiki/Home/
Galaxy is an open, web-based platform for data intensive biomedical research. Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses.
- Jordi Capellades (j.capellades.to@gmail.com) - Universitat Rovira i Virgili (Tarragona, Spain)
- Matthias Bernt (m.bernt@ufz.de) - Helmholtz Centre for Environmental Research - UFZ
- Ralf J. M. Weber (r.j.weber@bham.ac.uk) - University of Birmingham (UK)
Released under the GNU General Public License v3.0 (see LICENSE file)