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cwltool --validate doesn't check for InlineJavascriptRequirement when it should #1873

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sjaenick opened this issue Jul 4, 2023 · 1 comment
Open

cwltool --validate doesn't check for InlineJavascriptRequirement when it should #1873

sjaenick opened this issue Jul 4, 2023 · 1 comment

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@sjaenick
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sjaenick commented Jul 4, 2023

Hi,

cwltool 3.1.20230601100705

For a workflow with cwlVersion: 1.2 and some steps only executed conditionally via when, cwltool
successfully validates the workflow even if InlineJavascriptRequirement is not specified.
@sjaenick
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sjaenick commented Jul 4, 2023

Sample workflow e.g. at https://github.com/MGX-metagenomics/cwl/blob/master/metagenome-assembly-pipeline.cwl - cwltool --validate still reports success even if the InlineJavascriptRequirement is removed.

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@sjaenick