-
-
Notifications
You must be signed in to change notification settings - Fork 199
Notable CWL mentions, adoption, and users
The purpose of this page is to link to announcements, reports, and/or code of notable projects, groups, or initiatives using, promoting, or adopting CWL.
Listing does not imply endorsements of the CWL standards by the entity nor endorsement of the entity by the CWL project
- Cross-domain
- Radio Astronomy
- Hydrology
-
Life Sciences
- US Food and Drug Administration (FDA)
- US National Institutes of Health (NIH)
- Gabriella Miller Kids First Data Resource Center
- Children’s Hospital of Philadelphia
- European Open Science Cloud - Life (EOSC-Life)
- BioExcel, Centre of Excellence for Computational Biomolecular Research
- ELIXIR
- Wellcome Trust Sanger Institute
- Memorial Sloan Kettering Cancer Center
- UNLOCK
- PubSeq
- Geospatial
-
Science Demonstrator: LOFAR data
"All major GDC data production pipelines are written in the Common Workflow Language."
"CWL provides an additional transparent layer between workflow description and workflow execution, that allows even better scalability through parallel execution and portability. "
Zhang, Z., Hernandez, K., Savage, J. et al. Uniform genomic data analysis in the NCI Genomic Data Commons. Nat Commun 12, 1226 (2021). https://doi.org/10.1038/s41467-021-21254-9
The GDC workflows are at https://github.com/NCI-GDC/gdc-workflow-overview
"Within the 15 months since the launch of the CGC, over 1,900 researchers have registered on the platform, representing 150 institutions across 30 countries. In total, CGC users have deployed more than 5,000 tools or workflows and performed 80,000 executions, representing over 97 years of total computation. There is significant collaboration among users, with an average of seven members per project on the platform."
The NIH Common Fund-supported Gabriella Miller Kids First Data Resource Center enables researchers, clinicians, and patients to work together to accelerate research and promote new discoveries for children affected with cancer and structural birth defects. The group collects patient data and processes the data with CWL workflows in order to create a dataset that is ready for further research to better know the diseases and ultimately improve outcomes for children with similar problems in the future.
-
2018 Implementation Study: Enabling the reuse, extension, scaling, and reproducibility of scientific workflows
-
2018 Implementation Study: Compatible Cloud Analysis Platform
-
ELIXIR Cloud CWL-WES
UNLOCK is an open infrastructure for exploring new horizons for research on microbial communities
http://covid19.genenetwork.org/ is a public data and workflow initiative targeting COVID19 (initially). PubSeq uses RDF/SPARQL, CWL and Arvados extensively.
Integrated CWL as part of their Exploitation (data analytics) Platforms
~5 minutes each promotional videos: