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Refactor doctor visits to use smoothing package #436

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Closes #435

Summary of Changes:

  • Update doctor visits to use new smoothing utils

There are no tests written yet so I verified an example by hand for now.

Like #401: I branched this off dv-package but had to merge main in to get the most up to date geo utils, so the changes are...unreadable. Could remedy this by merging main into dv-package.

eujing and others added 30 commits October 7, 2020 13:25
Further refactoring for the geo coding utility
Propagate geomapper changes into JHU
* use geocode utility source file and remove old static source file
* update tests
* update validation notebook to verify prop signals in NYC
Co-authored-by: Addison Hu <huisaddison@gmail.com>
Allow archive to be run as its own module
* change valid geo_res
* change GEO_RESOLUTIOSN in run.py
* update tests to use "county"
Fix JHU bug that renamed fips to county in receiving
Propagate fips -> county filename fix from JHU back into main
Co-authored-by: krivard <krivard@cs.cmu.edu>
krivard and others added 23 commits October 29, 2020 14:04
Propagate 328 (JHU population fix and function refactor) to main
Remove cruise ships FIPS codes, 88888 and 99999, from JHU
Propagate JHU linting fixes into main
Propagate safegraph repairs into main
Turn on `test_run` tests for usafacts
add pylintrc file to each indicator
Refactor usafacts to use geo utils
Remove in-place modification of data frames in Safegraph processing.
Remove extraneous functions and calls from usafacts
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chinandrew commented Nov 5, 2020

blocked by #437 (EDIT: UNBLOCKED)

@krivard krivard added the blocked This task is waiting for completion of another task label Nov 5, 2020
@krivard krivard added this to In progress in Engineering via automation Nov 5, 2020
@krivard krivard removed the blocked This task is waiting for completion of another task label Nov 10, 2020
@chinandrew chinandrew linked an issue Nov 10, 2020 that may be closed by this pull request
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doctor_visits - smoothing refactor
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