A template project structure for reproducible research (RR) projects.
This repo is designed to make reproducible research projects easy. It has a basic project folder structure and follwos an easy to remember naming convention:
- data-raw: all input data (and metadata) used in the project. Note: Same name as data packages in R
- data: intermediate or output data files (e.g. simulation outputs, processed data, cleaned data). Note: Same name as data packages in R
- figs: figures generated by the analysis.
- R: R scripts with function definitions. Note: Same name as data packages in R
- notes: keep track of ideas, rationale, concerns, discussion and decisions about analysis/project.
- doc: manuscript or scientific article.
- reports: RMarkdown or Markdown files that document analysis (e.g. reproducible reports).
- webapp: prototype(s) of Shiny web apps. When it goes into production, it should be in a separate repo.
- README.Rmd: the document you are reading.
- LICENCE: licence file (see choose license).