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General purpose package containing useful functions for microbiome analysis pipelines

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cbmbtools - General purpose package containing useful functions for microbiome analysis pipelines

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Installation

First, install the devtools package (if it isn't already) and then load it.

if (!require(devtools)) install.packages("devtools")
library(devtools)

Next, install and load cbmbtools.

install_github("https://github.com/cb-42/cbmbtools")  
library(cbmbtools)

The functions, templates, and datasets contained within cbmbtools should now be accessible within your R environment.

To update a previous installation to the latest version, use:

devtools::update_packages("cbmbtools")

Note that this package is in active development. If a newer version of cbmbtools is installed after the library has already been loaded in the current R session, you may need to restart your R session and then update/load the latest version.

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General purpose package containing useful functions for microbiome analysis pipelines

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