Releases · carpentries-incubator/SDC-BIDS-sMRI

SDC-BIDS-sMRI v1.0.0: initial release.

Summary of changes:

Initial release: all commits since the beginning of the development.

Last release prior to transitioning to the new Carpentries Workbench
infrastructure.

What's Changed

Quantification episode intro and skeleton by @neurorepro in #1
Add tissue segmentation and visualization by @neurorepro in #2
Update introduction and add second part of the quantification episode by @neurorepro in #4
5_statistical analysis_1 by @devdinie in #3
Lesson 1 and 2 notebooks added by @nikhil153 in #5
added spatial normalization notebook by @nikhil153 in #6
@devdinie 5_episode520_visualization_Examples1 by @devdinie in #7
Update all but last section to be finished by @neurorepro in #8
Add some minor changes by @neurorepro in #9
Added reproducibility notebook and related data by @nikhil153 in #10
All but final FS stats for episode 4. Add notebook. by @neurorepro in #11
Move notebook to the right folder by @neurorepro in #12
updated index.md by @nikhil153 in #13
updated 01_episode with python snippets by @nikhil153 in #14
removed VBM sections by @nikhil153 in #15
updated episode 2 with python snippets by @nikhil153 in #16
updated episode 3 with more images and snippets by @nikhil153 in #17
updated setup.md by @nikhil153 in #18
Updated episode 3 by @nikhil153 in #22
5_Update_statistical_analysis by @devdinie in #19
5_Updating preprocessing for VBM - complete by @devdinie in #23
5_ update formatting and correcting errors from last merge by @devdinie in #25
5_ updating broken link & mialigned fig by @devdinie in #26
Updateed QC and reproducibility lessons by @nikhil153 in #27
file and directory renaming to be consistent by @nikhil153 in #28
more renaming and update to course_flow figure by @nikhil153 in #29
fixed paths in statistical analysis by @nikhil153 in #30
fixed README lesson titles by @nikhil153 in #31
fixed episode names in headers by @nikhil153 in #32
added local data by @nikhil153 in #35
Add subject examplar by @neurorepro in #36
completed cortical thickness analysis with AOMIC data by @nikhil153 in #37
Changed notebooks to use test subjects from AOMIC by @nikhil153 in #38
Changed notebooks to use test subjects from AOMIC by @nikhil153 in #39
updated episode 1 with mprage info by @nikhil153 in #40
minor changes to notebooks by @nikhil153 in #41
Add initial changes of quantification episode. Add fmriprep derivatives. by @neurorepro in #42
added fMRIPrep example and more BIDS info in notebooks by @nikhil153 in #44
Iquant by @neurorepro in #43
updated course flow images to match name changes by @nikhil153 in #45
fixed bunch of typos by @nikhil153 in #46
Iquant by @neurorepro in #47
Clean both superfluous notebooks and data. Add minor changes to both … by @neurorepro in #48
added pybids by @nikhil153 in #49
Iquant by @neurorepro in #50
minor changes to figures by @nikhil153 in #51
Add cortical thickness stat analysis by @neurorepro in #52
Add remaining content of stat episode and code by @neurorepro in #53
Add tree to binder by @neurorepro in #54
Fix typo. Add solution to challenge. by @neurorepro in #55
Iquant by @neurorepro in #56
Update README.md by @jbpoline in #57
Updated email by @nikhil153 in #60
urgent: fix workflows by @zkamvar in #58