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scTenifoldNet: Construct and Compare scGRN from Single-Cell Transcriptomic Data

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@dosorio dosorio released this 09 Apr 13:57
· 230 commits to master since this release

A workflow based on machine learning methods to construct and compare single-cell gene regulatory networks (scGRN) using single-cell RNA-seq (scRNA-seq) data collected from different conditions. Uses principal component regression, tensor decomposition, and manifold alignment, to accurately identify even subtly shifted gene expression programs.

  • Python dependency was removed