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Allow GWAS-VCF files to be read by ldsc #289

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Allow GWAS-VCF files to be read by ldsc #289

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Commits on Oct 21, 2020

  1. adding bcf support for h2

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  2. bcf seems to be working

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  3. fix

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  4. updated bcf parsing

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  5. Convert EFFECT to float for BGC BCF format change

    @YiLiu6240 @explodecomputer
    YiLiu6240 authored and explodecomputer committed Oct 21, 2020
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  6. added vcf support

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  7. updated to work with revised vcf format

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  8. allowing vcf spec where ss is in header

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  9. added vcf test files

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  10. now using pygwasvcf

    @explodecomputer
    Matthew Lyon authored and explodecomputer committed Oct 21, 2020
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  11. Revert "pygwasvcf"

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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  12. updates

    @explodecomputer
    explodecomputer committed Oct 21, 2020
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