0.1.9

AbCorrect

• Added Unix sort for UID clustering
• Made Unix sort the default method for clustering UIDs. CD-HIT is still available by providing the --cdhit-cluster-uids option

0.1.8

Merge pull request #36 from briney/development

Development

0.1.7

AbCorrect

• Add ability to directly parse 'MINIMAL' output format from AbStar
• Consensus/centroid sequence creation is now done in batches, size can be set with the --chunksize option
• Option to parse multiple UIDs, useful when dual barcodes are used.
• Stub out distributed processing on Celery clusters (not thoroughly tested yet)

AbStats

• Started migration of AbStats to just the Stats module, since it's primarily only used via the API (not as a command line program)

0.1.6

AbCorrect

Performance improvements
Add ability to directly process JSON files (as opposed to requiring sequences to be in a MongoDB database)

0.1.5

bump PyPI version to 0.1.5

0.1.3

Bug Fixes

Add requirements.txt to MANIFEST.in

0.1.2

New Features

• Add jobs module, with utilities for monitoring multiprocessing or celery jobs
• Add background option for index creation in abtools.mongodb
• Add decorators module, with lazy_property and coroutine decorators
• New convert module for conversion of sequence formats (currently only has ABI to FASTA, more are in the works)

v0.1.1

Merge pull request #13 from briney/development

bump pypi version, add utils.properties