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Another attempt to fix compilation on macOS
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bodkan committed May 10, 2024
1 parent 5473be4 commit 1595e70
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4 changes: 3 additions & 1 deletion .github/workflows/R-CMD-check.yaml
Expand Up @@ -63,11 +63,13 @@ jobs:
# openblas library files)
export LDFLAGS="-L/usr/local/opt/openblas/lib"
export CPPFLAGS="-I/usr/local/opt/openblas/include"
export LDLIBS="-llapack -lgsl -lopenblas -lm -lnick"
export CFLAGS="-c -g -p -pg -Wimplicit -I./ -I./nicksrc -Wno-implicit-function-declaration"
# compile ADMIXTOOLS and move binaries under bin/
cd src
make clobber
make LDLIBS="-llapack" CFLAGS="-c -g -p -pg -Wimplicit -I./ -I./nicksrc -Wno-implicit-function-declaration" all
make all
make install
# download testing data for unit tests
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