BioSimulations-Physiome provides a command-line application for publishing the Physiome model repository of CellML models to the BioSimulations repository for simulation projects.
This command-line program is run weekly by the GitHub action in this repository.
- Python >= 3.10
- pip
pip install git+https://github.com/biosimulations/biosimulations-physiome.git#biosimulations-physiome
API documentation is available here.
This package is released under the MIT license. Physiome is licensed under the Creative Commons Attribution 3.0 Unported License.
This package was developed by the Karr Lab at the Icahn School of Medicine at Mount Sinai in New York and the Center for Reproducible Biomedical Modeling. Physiome was developed by the Auckland Bioengineering Institute at The University of Auckland, with assistance from the contributors listed here.
We enthusiastically welcome contributions to BioSimulations-Physiome! Please see the guide to contributing and the developer's code of conduct.
This work was supported by National Institutes of Health award P41EB023912.
Please contact the BioSimulations Team with any questions or comments about this package. Please contact the Physiome Team with any questions or comments about Physiome.