Release 4.8.2

What's Changed

• OWDifferentialExpression: fix data inputs and outputs by @JakaKokosar in #346
• [CI] Replace release workflow with reusable one by @PrimozGodec in #347
• [ENH] GEO Datasets: Move GDSInfo initialization in a worker thread by @ales-erjavec in #319

Full Changelog: 4.8.1...4.8.2

Release 4.8.1

What's Changed

• Raise the required resdk package version by @JureZmrzlikar in #345

New Contributors

• @JureZmrzlikar made their first contribution in #345

Full Changelog: 4.8.0...4.8.1

Release 4.8.0

What's Changed

• [FIX] annotate_projection: Delaunay attribute 'vertices' deprecated in favour of 'simplices' by @JakaKokosar in #340
• [FIX] Fix tests and lint by @JakaKokosar in #341
• [ENH] Updated documentation by @lenatr99 in #338
• GSEA: sorting and organism bug by @lenatr99 in #344
• [ENH] GEO data sets: fix categorization of variables by @lenatr99 in #342
• [ENH] dictyExpress: Time as ContinuousVariable by @lenatr99 in #343

New Contributors

• @lenatr99 made their first contribution in #338

Full Changelog: 4.7.2...4.8.0

Release 4.7.2

What's Changed

• CI - Automatic rebase by @PrimozGodec in #330
• resolwe.utils: time as column name for Dicty express data by @JakaKokosar in #335

Full Changelog: 4.7.1...4.7.2

Release 4.7.1

What's Changed

• [ENH] Updated marker genes icon by @larazupan in #329

Full Changelog: 4.7.0...4.7.1

Release 4.7.0

What's Changed

• [FIX] Rework GEO datasets model by @ales-erjavec in #318
• [ENH] OWSingleSampleScoring: add a new widget by @JakaKokosar in #324
• [ENH] Rework Gene Sets widget by @JakaKokosar in #325
• [ENH] Updated widget icons by @larazupan in #326
• [FIX] OWGeneSetEnrichment: fix icon path by @JakaKokosar in #327
• [FIX] OWSingleSampleScoring: fix icon path by @JakaKokosar in #328

Full Changelog: 4.6.0...4.7.0

Release 4.6.0

What's Changed

• Keep docutils <0.16 for documentation by @PrimozGodec in #299
• [ENH] Add QC data to Genialis Expression widget by @JakaKokosar in #311
• Annotate Projection: Fix commit invoke by @VesnaT in #308
• [FIX] Fix compatibility with Python 3.10 by @ales-erjavec in #313
• [FIX] Replace colorpalette and other necessary fixes by @PrimozGodec in #314
• kegg: Fix kegg.from_taxid mapping due to change in api search results by @ales-erjavec in #316
• [FIX] QtCore.Qt.ItemIsTristate is deprecated. Use ItemIsUserTristate instead by @JakaKokosar in #320
• [ENH] update ci and fix lint warnings by @JakaKokosar in #321
• [ENH] Export gene sets enrichment report by @JakaKokosar in #322
• [FIX] Owgenialisexpressions: fix sign in dialog, remove info box, use defered commit by @JakaKokosar in #323

Full Changelog: 4.5.0...4.6.0

Release 4.5.0

Changed

• #290: (OWAnnotateProjection) follow widget UI style guidelines
• #289: Refactor GUI components of resolwe widgets
• #286: Change the documentation theme

Fixed

• #289: Fix for breaking changes in requests-cache package
• #288: Fix for issues that occurred after changes in widget auto-summary were introduced

Release 4.4.0

Changed

• #282: (OWGenialisExpressions) use CollectionTables to fetch data

Release 4.3.1

Fixed

• #281: (OWKEGGPathwayBrowser) Fix selection.

Changed

• #282: (OWdictyExpress) use CredentialManager and ConcurrentWidgetMixin.