Big Data Genomics (BDG) bdg-formats provides Apache Avro schema for genomic data such as genomic sequences, reads, alignments, variants/genotypes, and features. The schema are used to generate a library of Java code used by downstream projects such as ADAM, Cannoli, and Mango.
Add the following dependency to your Maven build:
<dependency>
<groupId>org.bdgenomics.bdg-formats</groupId>
<artifactId>bdg-formats</artifactId>
<version>${version}</version>
</dependency>Install Apache Maven version 3.3.3 or later.
$ mvn packagebdg-formats is released under an Apache 2.0 license.