Berens Lab @ University of Tübingen
- 44 followers
- Tübingen, Germany
- https://hertie.ai/data-science
- philipp.berens@uni-tuebingen.de
Popular repositories
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rna-seq-tsne
rna-seq-tsne PublicThe art of using t-SNE for single-cell transcriptomics
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pubmed-landscape
pubmed-landscape PublicThe landscape of biomedical research
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neural_data_science
neural_data_science PublicContains programming labs and lecture notes for the lecture "Neural Data Science"
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umi-normalization
umi-normalization PublicCompanion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Genome Biology
Repositories
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- ne_spectrum_scRNAseq Public
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- poisson-gpfa Public Forked from mackelab/poisson-gpfa
Gaussian process factor analysis with Poisson observations
- elephant-in-the-room Public
Companion repository to our Lause, Berens & Kobak (2024) preprint "The art of seeing the elephant in the room: 2D embeddings of single-cell data do make sense" (bioRxiv)
- medical-t-simcne Public
This repository contains the codes to train a t-SimCNE model. This model has been shown to produce good representations on natural and medical images.
- picasso Public Forked from pachterlab/picasso
Picasso: a methods for embedding points in 2D in a way that respects distances while fitting a user-specified shape.
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