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becavin-lab

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  1. bacnet bacnet Public

    BACNET is a Java based platform to develop website for multi-omics analysis

    Java 13 1

  2. MeRIPSeq MeRIPSeq Public

    MeRIP-Seq pipeline analysis for m6a methylation site detection

    Python 6

  3. checkatlas checkatlas Public

    One liner tool to check the quality of your single-cell atlases.

    HTML 3 1

  4. ListeriomicsSample ListeriomicsSample Public

    Sample dataset used for starting up BACNET demo

    Shell 1

  5. RIPSeq-Listeria RIPSeq-Listeria Public

    RIP-Seq and RNA-Seq of an RNA-binding protein secreted by Listeria monocytogenes which activates RIG-I signaling Secreted bacterial

    R 1 2

  6. cellranger-to-scanpy cellranger-to-scanpy Public

    A small python script to import cellranger analysis into Scapy. It loads scRNA-Seq experiment out of cellranger, includes the count matrices, the UMAP+T-SNE reduction, the clustering, and normalize…

    Python 1

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