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Baum Lab

Applied ecology for impacted oceans - our code, papers and plots

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  1. Gitting-started Gitting-started Public

    Readme for Baum lab: how to set up repos, write R-markdown docs, and collaborate with Git

    HTML 8 6

  2. Claar_etal_2018_PLoSOne Claar_etal_2018_PLoSOne Public

    Code, data, and figures for Claar et al manuscript "Global patterns and impacts of El Niño events on coral reefs: a meta-analysis." (PLOS ONE)

    R 1

  3. DunicBaum_2017_JAnimEcol DunicBaum_2017_JAnimEcol Public

    R

  4. Robinson_etal_2017_GlobalChangeBiology Robinson_etal_2017_GlobalChangeBiology Public

    Code accompanying Robinson et al. Fishing degrades size structure of coral reef fish communities (2016, Global Change Biology).

    R 2

  5. Robinson_etal_2018_CoralReefs Robinson_etal_2018_CoralReefs Public

    R code accompanying Robinson et al. Environmental conditions and herbivore biomass determine coral reef benthic community composition: implications for quantitative baselines.

    R 2 1

  6. White_etal_2015_ConsBiol White_etal_2015_ConsBiol Public

    This repository contains code and additional figures for work on Cocos Island

    R 1 1

Repositories

Showing 10 of 33 repositories
  • Gitting-started Public

    Readme for Baum lab: how to set up repos, write R-markdown docs, and collaborate with Git

    HTML 8 6 1 0 Updated Apr 24, 2024
  • Baum_etal_2023_ScienceAdvances Public
    R 1 0 0 0 Updated Jan 30, 2024
  • Starko_et_al_Porites_KI Public

    Code and data associated with Starko et al. (2023): Marine heawaves threaten cryptic coral diversity and erode associations amongst coevolving partners.

    R 0 GPL-3.0 1 0 0 Updated Jul 21, 2023
  • Maucieri_etal_2023_ProcRoyB Public

    Data and R code for: Tipping points and interactive effects of chronic human disturbance and acute heat stress on coral diversity

    HTML 0 0 0 0 Updated Mar 10, 2023
  • gya-research Public

    GYA fundamental research - survey response

    R 0 0 0 0 Updated Aug 23, 2022
  • Maucieri_Baum_2021_BioCon Public

    Data and R code for: Impacts of heat stress on soft corals, an overlooked and highly vulnerable component of coral reef ecosystems, at a central equatorial Pacific atoll

    R 0 0 0 0 Updated May 26, 2022
  • BarkleySound_CanopyKelp Public Forked from sstarko/BarkleySound_CanopyKelp

    Data and code associated with Starko et al. 2022. Ecological Applications.

    R 0 2 0 0 Updated Mar 30, 2022
  • Osgood_etal_2021_JAE Public

    Data and R code for: Effects of climate-change driven gradual and acute temperature changes on shark and ray species

    R 0 0 0 0 Updated Jun 18, 2021
  • Chalifour_etal_2021_CJFAS Public

    Code accompanying Chalifour et al. 2021. Chinook salmon exhibit long-term rearing and early marine growth in the Fraser River, B.C., a large urban estuary. CJFAS

    R 2 GPL-3.0 1 0 0 Updated Dec 15, 2020
  • WestGridIntro Public

    This repository serves as a learning space for Baum lab members wishing to learn about using WestGrid for data storage, and advanced computation.

    0 0 0 0 Updated Nov 10, 2020
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