This script simulates viral outgrowth and rebound from the HIV latent reservoir based on the stochastic model of Hill et al. In addition to the basic model of Hill et al. we also consider the stochastic accumulation of mutations within a certain span of the genome.
Simulating viral rebound from the latent reservoir
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bartonlab/simple-rebound-simulation
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Simulating viral rebound from the latent reservoir
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