Computational Biology and Bioinformatics integrate biological data with computational analysis to understand complex biological systems. They employ algorithms and statistical techniques to interpret biological data, aiding in drug discovery, genomics, and understanding disease mechanisms.
The integration of Artificial Intelligence (AI) and Machine Learning (ML) has revolutionized Computational Biology and Bioinformatics. AI algorithms can predict protein structures, analyze genomic sequences, and model molecular interactions, accelerating research and enabling personalized medicine. ML techniques offer insights into complex biological phenomena, paving the way for breakthroughs in disease diagnosis, drug development, and understanding genetic variations. This repository contains a curated list of top Computational Biology and Bioinformatics learning resources offered by renowned universities.
| Source | Course | Lecturer | Year | Difficulty | URL |
|---|---|---|---|---|---|
| Harvard University | Computational Biology and Bioinformatics | Xiaole Shirley Liu | 2021 | ⭐⭐ | Youtube |
| Harvard University | Computational Biology and Bioinformatics | Xiaole Shirley Liu | 2020 | ⭐⭐ | Youtube |
| Harvard University | Computational Biology and Bioinformatics | Xiaole Shirley Liu | 2019 | ⭐⭐ | Youtube |
| Harvard University | Computational Biology and Bioinformatics | Xiaole Shirley Liu | 2018 | ⭐⭐ | Youtube |
| - | Shomu's Bioinformatics with practical (SBWP) | Suman Bhattacharjee | - | ⭐⭐ | Youtube |
| MIT | 7.91J Foundations of Computational and Systems Biology | Christopher Burge, David Gifford, Ernest Fraenkel | 2015 | ⭐⭐⭐ | Youtube |
| Data Professor | Machine Learning for Drug Discovery, Bioinformatics | - | - | - | Youtube Youtube |
| - | GENOMIC & PRECISION MEDICINE ONLINE COURSE | - | - | - | URL |
| Stockholm University | Introduction to Bioinformatics | Arne Elofsson | YT |
- Pathogen Genomics: A New Era in Global Health Surveillance and Strategy
- A Practical Guide for SARS-CoV-2 Whole Genome Sequencing 4.6 (36 reviews)
- Making sense of genomic data: COVID-19 web-based bioinformatics
- The Power of Genomics to Understand the COVID-19 Pandemic
- All Free Health Courses
- Graph-based Molecules/Drugs: Valance Labs
- European Bioinformatics Institute - EMBL-EBI
- SIB - Swiss Institute of Bioinformatics
- Faculty of Bioengineering and Bioinformatics, MSU
- University of Michigan Computational Medicine and Bioinformatics
- Rosalind Learning Through Problem Solving: http://rosalind.info/problems/locations/
- Rosalind list of University Bioinfo Courses: http://rosalind.info/courses/
- Data Science: http://rafalab.github.io/pages/teaching.html
- Bioinformatics courses from SLU: https://www.hadriengourle.com/tutorials/
- Bioinformatics tutorials Ijaz lab: http://userweb.eng.gla.ac.uk/umer.ijaz/#bioinformatics
- Bioconductor talks/intros/workshops: https://www.bioconductor.org/help/course-materials/
- RMarkdown intro: https://ourcodingclub.github.io/tutorials/rmarkdown/
- https://kbroman.org/pages/tutorials.html
- Bioinformatics Book Pevsner lab: http://www.bioinfbook.org/
- YaleDHLab workshops: https://github.com/YaleDHLab/lab-workshops
- UMich Exploratory Data Analysis for Health (videos): https://kdpsingh.lab.medicine.umich.edu/lhs610
- Command line intro: https://github.com/YaleDHLab/lab-workshops/tree/master/command-line
- Jupyter Notebook workshop machine learning: https://github.com/YaleDHLab/labworkshops/blob/master/machine-learning/machine-learning.ipynb
- Fundamentals of data visualization: https://serialmentor.com/dataviz/index.html
- Data visualization intro: https://columbiaviz.github.io/2018f_w4995/
- Applied Biological Materials : https://www.youtube.com/@abmgood
- http://cecileane.github.io/computingtools/
- Population genomics book: https://github.com/cooplab/popgen-notes/releases/tag/v1.1
- Single-cell RNA-seq collection: https://osca.bioconductor.org/learning-r-and-more.html
- Old 2011 EBI course: https://www.ebi.ac.uk/training/online/course/embo-practical-course-analysishigh-throughput-seq/introduction-r-and-bioconductor
- Notes on data science and machine learning https://chrisalbon.com/
- https://bioconductor.org/packages/release/bioc/vignettes/edgeR/inst/doc/edgeRUsersGuide. pdf
- understanding interactions: http://genomicsclass.github.io/book/pages/interactions_and_contrasts.html
- https://satijalab.org/seurat/
- https://icb-scanpy.readthedocs-hosted.com/en/stable/tutorials.html
- Web Seminars of Swiss Institute of Bioinformatics https://www.youtube.com/playlist?list=PLoCxWrRWjqB1JUCntl4X09ezmOtKx1Gke
- Darren Wilkinson's blog (quite computational) https://darrenjw.wordpress.com/2010/01/30/yet-another-introduction-to-r-and-bioconductor
- Online ML University: AI & ML Resources from Top Universities
- DataCamp Mega Collection
- Awesome ICLR 2024 Graph Paper Collection
- Awesome-LLMs-ICLR-24
Azmine Toushik Wasi
