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WebMGA

WebGL Molecular Graphics Application

WebMGA was developed by Eduardo Battistini in 2020-21 for his final project within the BSc Computer Science at University College London, supervised by Guido Germano, Michael P. Allen, and Tobias Ritschel.

The WebGL Molecular Graphics Application, or WebMGA, is a web-based visualisation tool for coarse-grained molecular models that utilises prolated and elongated convex bodies as the elementary units of simulation.

Given the prevalence of said geometries in the modelling of liquid crystal systems and the lack of available visualisation platforms suitable for this niche, WebMGA provides a unique, out-of-the-box solution for researchers and educators to generate, stylise, and interact with three-dimensional renders of molecular simulations.

WebMGA is written in Javascript, and implements the graphics library Three.js for rendering images and the React Suite library to provide a sleek user interface that is intuitively compartmentalised and easy to learn.

WebMGA is an evolution of QMGA, an OpenGL and Qt3 bapplication written in C++, that filled this gap in molecular graphics in 2008.

Citing WebMGA

If you use pictures produced with WebMGA in a scientific publication, please cite with a text like:

“The pictures were produced with WebMGA [1], an evolution based on WebGL of QMGA [2].”

  1. Eduardo Battistini Parra, “WebMGA, a WebGL Molecular Graphics Application for the Interactive Rendering of Coarse-Grained Liquid Crystal Models”, BSc Thesis in Computer Science, UCL, 2021, https://astromarx.github.io/WebMGA.
  2. Adrian T. Gabriel, Timm Meyer, Guido Germano, "Molecular graphics of convex-body fluids", Journal of Chemical Theory and Computation 4, 468-476, 2008, DOI 10.1021/ct700192z, http://qmga.sourceforce.net.

License

Copyright 2021. Carlos Eduardo Battistini Parra.

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

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