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@arms-mbon

ARMS-MBON (a Marine Biodiversity Observation Network)

README.md

This is the GitHub space for ARMS-MBON, providing access to the data outputs of the project.

ARMS-MBON began in 2017 under the ASSEMBLE Plus project (EU Horizon 2020, grant nr. 730984) and has continued operating in collaboration with EMBRC in its EMO BON programme. In ARMS-MBON we carry out marine hard-bottom sampling using ARMS units distributed along the European coastline. In this GH space are all the data coming out of these ARMS-MBON sampling activities: logsheets, images, raw sequences (which are archived in ENA), and analysis results of the sequences. We produce human- and developer-friendly versions of all the final data, and you can find data linked to particular data publications here.

Go to the ARMS-MBON data landing page for a web-friendly version of this GH space.

Popular repositories

  1. data_workspace data_workspace Public

    This repo is the working area for ARMS-MBON event and omics data: data are collected, harvested, combined, reformatted

    Python 2 1

  2. documentation documentation Public

    ARMS documentation: Handbook, DMP, SOPs, templates

    1

  3. arms-mbon.github.io arms-mbon.github.io Public

    This repo holds the basis for the data landing page and spaces (profiles, publications, crates, data-explorers)

    1

  4. .github .github Public

  5. data_release_001 data_release_001 Public

    Taxonomic occurrences of the COI, 18S, and ITS marker genes from the first ARMS-MBON sampling campaign submitted to EurOBIS, plus sampling event metadata, image metadata

  6. analysis_release_001 analysis_release_001 Public

    Output of PEMA processing of the genetic data from the first ARMS-MBON sampling campaign submitted to EurOBIS (taxonomic occurrences of the COI, 18S, and ITS marker genes)

Repositories

Showing 8 of 8 repositories
  • data_workspace Public

    This repo is the working area for ARMS-MBON event and omics data: data are collected, harvested, combined, reformatted

    Python 2 MIT 1 3 0 Updated May 22, 2024
  • darwin-core-generator Public
    Python 0 0 0 0 Updated Apr 30, 2024
  • documentation Public

    ARMS documentation: Handbook, DMP, SOPs, templates

    1 0 1 0 Updated Apr 24, 2024
  • code_release_001 Public

    Code used for the analyses of the data paper associated with data_release_001

    R 0 0 1 0 Updated Apr 19, 2024
  • .github Public
    0 0 0 0 Updated Apr 15, 2024
  • data_release_001 Public

    Taxonomic occurrences of the COI, 18S, and ITS marker genes from the first ARMS-MBON sampling campaign submitted to EurOBIS, plus sampling event metadata, image metadata

    0 MIT 0 1 0 Updated Mar 27, 2024
  • analysis_release_001 Public

    Output of PEMA processing of the genetic data from the first ARMS-MBON sampling campaign submitted to EurOBIS (taxonomic occurrences of the COI, 18S, and ITS marker genes)

    0 MIT 0 0 0 Updated Mar 26, 2024
  • arms-mbon.github.io Public

    This repo holds the basis for the data landing page and spaces (profiles, publications, crates, data-explorers)

    1 0 1 0 Updated Mar 12, 2024

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