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Force field parameters and supplementary scripts for the "A coarse-grained model for DNA origami" paper by R. Reshetnikov, A. Stolyarova, A. Zalevsky et. al.

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aozalevsky/cosm_scripts

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deprecated

deprecated

 
 

errors

errors

 
 

static

static

 
 

.hgignore

.hgignore

 
 

README.md

README.md

 
 

cosm2full.py

cosm2full.py

 
 

cosm_restr.py

cosm_restr.py

 
 

json2cosm.py

json2cosm.py

 
 

movechains.py

movechains.py

 
 

plot.py

plot.py

 
 

run_cluster.sh

run_cluster.sh

 
 

run_em.sh

run_em.sh

 
 

val_lattice.py

val_lattice.py

 
 

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This is a set of tools running behind COSM - a web service for coarse-grained origami structures modeling.

Please read tutorial to understand function of specific scripts.

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Force field parameters and supplementary scripts for the "A coarse-grained model for DNA origami" paper by R. Reshetnikov, A. Stolyarova, A. Zalevsky et. al.

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science molecular-dynamics coarse-grained molecular-modeling dna-origami

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