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34 Open 90 Closed
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Issues list

Support dangling classes
#225 opened Apr 30, 2024 by cmungall
Conda installation not downloading latest version and not working with latest version
#224 opened Apr 9, 2024 by Vedanth-Ramji
Pronto fails to load OPMI by inferring wrong encoding
#221 opened Mar 28, 2024 by ElDeveloper
How to get cross-references descriptions? question A question about the library.
#220 opened Mar 28, 2024 by CarMoreno
1
Unable to create Pronto object since 2.5.6 (synonyms change)
#219 opened Mar 13, 2024 by Zethson
Potential bug | ValueError: identifier already in use when loading MONDO ontology
#216 opened Nov 18, 2023 by Odessit007
1
NotImplementedWarning: cannot process plain owl:AnnotationProperty cls(self).parse_from(_handle) # type: ignore
#198 opened Jan 5, 2023 by CarMoreno
1
Obtain ontology subgraph
#194 opened Dec 1, 2022 by maarten-devries
Add supports for catalogs in imports enhancement An issue to request an enhancement, or a pull request implementing one.
#186 opened Aug 30, 2022 by cmungall
1
How to extract all the terms from all the properties and the instances in a ontology?
#184 opened Jul 27, 2022 by ali3assi
Consider adding kgcl bindings
#180 opened Jul 6, 2022 by cmungall
Accessing children of a relationship
#177 opened Jun 21, 2022 by manulera
3
Getting Relationships question A question about the library.
#174 opened Jun 8, 2022 by krishanudb
3
It should be possible to filter out relationships based on GCIs enhancement An issue to request an enhancement, or a pull request implementing one. question A question about the library.
#163 opened Apr 16, 2022 by cmungall
1
Bioconda doesn't install latest Pronto question A question about the library.
#162 opened Mar 28, 2022 by ireneisdoomed
1
Is there a way to adjust the obo parsing strictness?
#159 opened Mar 23, 2022 by mwalzer
4
Loading ontologies fails (for me) in 2.4.4 bug Issues or pull requests that specify a bug. external An issue related to an external dependency or project.
#158 opened Mar 15, 2022 by mwalzer
3
CL has KeyError: 'CARO:0000000' external An issue related to an external dependency or project.
#156 opened Feb 16, 2022 by quirinmanz
4
How to parse Orphanet OWL file (new version 4.0) part_of relationship
#153 opened Jan 19, 2022 by LM-Ontologies
Dump as OWL enhancement An issue to request an enhancement, or a pull request implementing one.
#149 opened Sep 15, 2021 by cthoyt
6
OBO parsing fails with a misleading error message external An issue related to an external dependency or project.
#146 opened Jul 29, 2021 by mukund109
1
Error parsing aro.owl (identifier already in use) bug Issues or pull requests that specify a bug.
#140 opened Jun 11, 2021 by althonos
How to delete terms in ontology? enhancement An issue to request an enhancement, or a pull request implementing one.
#137 opened May 31, 2021 by saiden89
2
.obo SyntaxErorrs external An issue related to an external dependency or project.
#131 opened Mar 29, 2021 by joelduerksen
3
Error parsing cl.obo (from the readme) external An issue related to an external dependency or project.
#123 opened Feb 5, 2021 by jkanche
3
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