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sigma

Supporting code for the paper "Evaluating the structure-coefficient theorem of evolutionary game theory" by Alex McAvoy and John Wakeley, available at https://arxiv.org/abs/2010.14566.

Instructions

Dependencies can be installed by typing

make init

To reproduce the figures in the paper, with the same structures, use

python3 -m examples.figure_2 True
python3 -m examples.figure_si2 True
python3 -m examples.figure_si3

or just

make paper_examples

Note that figure_si3.py uses data produced by figure_si2.py, which, by default, is the same data depicted in the paper. Otherwise, to generate new figures like those in the paper (but with randomly-generated graphs), use

python3 -m examples.figure_2
python3 -m examples.figure_si2

or just

make new_examples

Parameters may be adjusted as needed in examples/figure_2.py and examples/figure_si2.py. Note that Figure SI1 can be generated using the code for Figure 2 with selection_intensity = 0.05 replaced by selection_intensity = 0.01.

Contact information

Please direct questions to Alex McAvoy (alexmcavoy@gmail.com).