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More accessible dump of the PWMs from ElemeNT (10.1080/21541264.2015.1067286)

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adamyhe/elemeNT_core_promoter_pwms

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ElemeNT position weight matrices

ElemeNT (Sloutskin et al., 2015) was a web app for visualizing core promoter elements. However, the web API appears to be down, and I couldn't find the resource elsewhere. I scraped the core promoter element PWMs published in the supplemental materials of the original paper and converted them into .csv files.

Files

ktrn-06-03-1067286-s001.zip -     Zip archive of raw supplemental files.
*.csv                       -     Core promoter element PWMs in csv format.
conversion_script.py        -     Converts csv files to txt files like from CisBP.
core_promoter_pwms.zip      -     Zip archive of conversion_script.py output. Structure mimics
                                  CisBP bulk download. For compatibility, e.g., with RTFBSDB.

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