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@abcwcm

Applied Bioinformatics Core @ Weill Cornell Medicine

Turning sequencing reads into biomedically-relevant answers. Scripts written by Paul Zumbo and Friederike Dündar.

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  1. Chandran2021 Chandran2021 Public

    Code and access to data related to the SIFT-seq publication by Chandran et al., Nature Medicine (2022)

    HTML 1

  2. GeartySchietinger GeartySchietinger Public

    Scripts related to bulkRNA-seq as well as single-cell CITE-seq and VDJ-seq data of Gearty et al. (2021)

    HTML 4 4

  3. Notaras_MolPsy Notaras_MolPsy Public

    Code for the analysis of brain-organoid-derived single-cell RNA-seq data as published in Notaras et al., 2021

    HTML 2

  4. Shakiba2020 Shakiba2020 Public

    Code for the analyses of bulk RNA-seq and ATAC-seq presented in Shakiba et al., J Exp Med (2021)

    Makefile 1

  5. Scott2019 Scott2019 Public

    Code and data for the bulk RNA-seq and bulk ATAC-seq data of tumor-infiltrating CD8 T cells (and controls) as published in Scott et al., Nature (2019).

    Makefile

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