Python_GDC_Correlation

Created for CSI4900 - Honours Project

A Python script to perform a simple correlation calculation on data from files containing integrated GDC RNA expression data.

Also contains function that can be used to show a scatter plot of a pair of genes from an integrated file.

Created to work with files/data generated by the following scripts:

1. Downloading: https://github.com/bbpgrs/Python_GDC_DL

2. Normalization: https://github.com/obawany/Normalizing-data-using-python

3. Integration (combining): https://github.com/bbpgrs/Python_GDC_Integration

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Required to run:

Python 3

Pandas library

pip install pandas

matplotlib library

pip install matplotlib