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@ZWang-Lab

ZWang-Lab

Popular repositories

  1. LBRAT LBRAT Public

    R package for retrospective association testing for longitudinal binary traits

    R 4 1

  2. G2S3 G2S3 Public

    G2S3 (Sparse and Smooth Signal of Gene Graph-based imputation)

    MATLAB 3

  3. tRFtarget tRFtarget Public

    tRFtarget (http://trftarget.net/) is a comprehensive platform consolidating both computationally predicted and experimentally validated binding interactions between transfer RNA-derived fragments (…

    JavaScript 2 1

  4. LSKAT LSKAT Public

    C++ 1 1

  5. fGWAS fGWAS Public

    GWAS tools for longitudinal genetic traits based on fGWAS statistical model

    R 1

  6. tRFtarget-pipeline tRFtarget-pipeline Public

    tRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).

    Python 1

Repositories

Showing 10 of 15 repositories
  • MAGEIT2 Public

    Marginal Gene-Environment Interaction Test with RANdom or FIXed

    C++ 0 0 0 0 Updated Oct 26, 2023
  • tRFtarget Public

    tRFtarget (http://trftarget.net/) is a comprehensive platform consolidating both computationally predicted and experimentally validated binding interactions between transfer RNA-derived fragments (tRFs) and target transcripts across multiple organisms.

    JavaScript 2 MIT 1 12 0 Updated Jun 8, 2023
  • SDePER_Analysis Public Forked from az7jh2/SDePER_Analysis

    This Github repository holds Notebooks and results of running SDePER on both Simulated and Real datasets, and Notebooks for Figure Panels in manuscript.

    HTML 0 MIT 2 0 0 Updated May 2, 2023
  • SDePER Public Forked from az7jh2/SDePER

    SDePER is a two-step hybrid machine learning and regression method considering platform effect, spatial information and sparsity in deconvolution of spatial transcriptomic data using reference single-cell RNA sequencing data. It's also able to impute cell type compositions and gene expression at enhanced resolution.

    Python 0 MIT 1 0 0 Updated May 1, 2023
  • tRFtarget-pipeline Public

    tRFtarget-pipeline is designed to find RNA-RNA interaction sites between transfer RNA-derived fragments (tRFs) and target RNAs, and is used in tRFtarget database (http://trftarget.net/).

    Python 1 MIT 0 0 0 Updated Mar 26, 2023
  • RVMMAT Public

    R package that performs retrospective varying coefficients mixed model association test for longitudinal binary traits in population samples.

    R 0 0 0 0 Updated Mar 25, 2023
  • RSIT Public

    R package that performs retrospective set-based gene-environment interaction tests for binary traits.

    R 0 0 0 0 Updated Feb 3, 2023
  • iDESC Public Forked from yl883/iDESC

    iDESC package for DE analysis in scRNA-seq data

    R 0 2 0 0 Updated Jul 28, 2022
  • RSVMMAT Public

    R package that performs retrospective set-based varying coefficient mixed model association tests for longitudinal binary traits.

    R 0 0 0 0 Updated Apr 18, 2022
  • G2S3_paper2020 Public
    R 0 1 0 0 Updated May 14, 2021
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