Resources

Packages to Install

install.packages(c("shiny", "shinyBS", "d3heatmap", "gplots", "ggdendro", "jpeg", "png", "tiff", "ggplot2", "grid", "ggtern", "MASS", "reshape2", "leaflet", "RColorBrewer", "raster", "xlsx", "devtools"))
library(devtools)
install_github('sbabicki/jscolourR')
install_github('ramnathv/htmlwidgets')
install_github('timelyportfolio/htmlwidgets_spin')

Microarray

• https://support.bioconductor.org/p/41629/

Geodensity

• https://github.com/mylesmharrison/TO_trafficsignals_heatmap
• https://developers.google.com/maps/documentation/javascript/examples/layer-heatmap
• http://stackoverflow.com/questions/18285415/density2d-plot-using-another-variable-for-the-fill-similar-to-geom-tile

Geomap

• https://gist.github.com/dsparks/4031654
• http://shiny.rstudio.com/tutorial/lesson5/
• http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2865395/
• http://www.mikerobe007.ca/2015/04/2012-alberta-election-results-poll-by.html

Existing Tools (first 5 pages of google search)

"heat map microarray"

• http://omictools.com/data-visualization-c468-p1.html
• http://discover.nci.nih.gov/tools.jsp
• http://sourceforge.net/projects/heatmapgenerator/
• http://smd.princeton.edu/resources/restech.shtml
• http://blog.insilicodb.com/post/105861260201/analyze-differential-gene-expression-from-my
• http://omictools.com/heatmapgenerator-s7879.html
• http://omictools.com/heatmapviewer-s5558.html
• http://omictools.com/mev-s878.html
• https://plot.ly/~sundargh/116/heatmap-of-microarray-signature/
• https://www.broadinstitute.org/scientific-community/science/programs/cancer/icbp/software
• http://www.chibi.ubc.ca/matrix2png/

"heat map latitude longitude"

• http://www.mapsdata.co.uk/how-to-use-mapsdata/
• https://www.myheatmap.com/
• http://imagine-it.org/google/geoiqmap.html
• http://www.openheatmap.com/
• http://simpleheatmap.com/
• http://www.highcharts.com/docs/maps/latlon
• http://vizpainter.com/category/mapping-geographic-visualization/
• http://tabsoft.co/1Jfqm58

"heat map choropleth" and "heat map geomap"

• http://www.imapbuilder.net/interactive-map-samples/heat-map-example.php
• https://www.mapbox.com/mapbox-studio/#darwin
• http://dev.vizicities.com/docs/blueprint-output-choropleth
• http://www.tableau.com/about/blog/2010/09/creating-choropleth-maps
• http://www.openheatmap.com/
• https://hrboss.com/node/546
• http://www.npgeomap.com/index.php/de/screenshots-de