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  1. superrec2 superrec2 Public

    Run and compare algorithms for phylogenetic reconciliation and super-reconciliation

    Python 5 1

  2. CoreTracker CoreTracker Public

    CoreTracker, a codon reassignment tracker

    Python 4 3

  3. GATC GATC Public

    Genetic Algorithm for gene Tree Construction/Correction optimal under sequence likelihood and reconciliation score

    C 4

  4. profileNJ profileNJ Public

    Forked from maclandrol/profileNJ

    Genome evolution-aware gene trees correction without losing sequence information

    Python 3

  5. SuperReconciliation SuperReconciliation Public

    Implementation of the Super-Reconciliation model for reconciling a set of trees accounting for segmental duplications and losses.

    C++ 3 1

  6. polytomy-solver-web polytomy-solver-web Public

    Web application for various LBIT phylogenetic algorithms.

    Python 1

Repositories

Showing 10 of 15 repositories
  • superrec2 Public

    Run and compare algorithms for phylogenetic reconciliation and super-reconciliation

    Python 5 GPL-3.0 1 0 0 Updated May 29, 2024
  • sowing Public
    Python 0 GPL-3.0 0 0 0 Updated Dec 13, 2023
  • Perl 0 0 0 0 Updated Jul 4, 2023
  • GATC Public

    Genetic Algorithm for gene Tree Construction/Correction optimal under sequence likelihood and reconciliation score

    C 4 GPL-3.0 0 1 0 Updated Mar 2, 2019
  • EdChecker Public

    Computational methods for RNA editing sites prediction

    Python 0 0 0 0 Updated Sep 27, 2018
  • SuperReconciliation Public

    Implementation of the Super-Reconciliation model for reconciling a set of trees accounting for segmental duplications and losses.

    C++ 3 1 0 0 Updated Aug 28, 2018
  • CoreTracker Public

    CoreTracker, a codon reassignment tracker

    Python 4 3 1 1 Updated May 9, 2018
  • LabelGTC Public

    Implementation of LabelGTC algorithm

    Python 0 GPL-3.0 0 0 0 Updated Apr 19, 2018
  • SuGeT Public

    SuperGeneTree maker

    C++ 0 GPL-3.0 0 0 0 Updated Apr 19, 2018
  • MiscTreeUtils Public

    Misc utils in python for phylogenetic analysis.

    Python 0 0 0 0 Updated Feb 1, 2018

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