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University Medicine Essen

Popular repositories

  1. SALT SALT Public

    Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.

    Python 71 3

  2. FHIR-PYrate FHIR-PYrate Public

    FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter reso…

    Python 54 10

  3. Body-and-Organ-Analysis Body-and-Organ-Analysis Public

    BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Composition Analysis, this tool is capable of analyzing medical …

    Python 11 2

  4. dicom-deidentifier-ts dicom-deidentifier-ts Public

    TypeScript 10

  5. DICOM-RST DICOM-RST Public

    A robust DICOMweb server with interchangeable backends

    Rust 9

  6. DeidentiFHIR DeidentiFHIR Public

    Scala 8 2

Repositories

Showing 10 of 14 repositories
  • Body-and-Organ-Analysis Public

    BOA is a segmentation tool of CT scans by the SHIP-AI group (https://ship-ai.ikim.nrw/). Combining the TotalSegmentator and the Body Composition Analysis, this tool is capable of analyzing medical images and identifying the different structures within the human body, including bones, muscles, organs, and blood vessels.

    Python 11 Apache-2.0 2 2 2 Updated May 3, 2024
  • SALT Public

    Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hierarchical relationships in the data.

    Python 71 MIT 3 1 1 Updated May 3, 2024
  • saros-dataset Public

    Sparsely Annotated Region and Organ Segmentation (SAROS) - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imaging data

    Python 4 MIT 0 0 1 Updated Apr 26, 2024
  • DeidentiFHIR Public
    Scala 8 MIT 2 9 1 Updated Apr 25, 2024
  • DICOM-RST Public

    A robust DICOMweb server with interchangeable backends

    Rust 9 MIT 0 1 0 Updated Apr 18, 2024
  • DeidentiFHIR-Pipeline Public
    Java 1 MIT 0 2 0 Updated Apr 17, 2024
  • MM-WS-Scala Public

    A library that implements websocket functionality in Scala 2

    Scala 0 0 0 1 Updated Mar 28, 2024
  • BOA-Contrast Public
    Python 2 MIT 0 2 3 Updated Mar 13, 2024
  • FHIR-Converter Public

    Thin wrapper around Microsoft FHIR Converter to allow for a standalone FHIR server that provides data conversion operations.

    C# 0 MIT 0 0 0 Updated Dec 4, 2023
  • FHIR-PYrate Public

    FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.

    Python 54 MIT 10 11 4 Updated Nov 23, 2023
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