Root3D Skeleton Traits calculates the traits based on skeleton by Olga Symonova (olga.symonova@gmail.com).
# skel [fileinput] [fileoutput] [scale]
skel /path/to/point/cloud.out /path/to/features.tsv 2.250.15
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...| File Format | Description | Purpose |
|---|---|---|
| or.iv | ||
| or.wrl | Object Mesh | Quality Control |
| sk.iv | ||
| sk.wrl | Skeleton Mesh | Quality Control |
| .tsv | Measurements | Analysis |
# Download and compile skel binary
git clone https://github.com/Topp-Roots-Lab/Gia3D.git && cd Gia3D && make- Original guide can be found in
compile-cmd; it can be found in early commits such as here: https://github.com/Topp-Roots-Lab/Gia3D/blob/8872645ec126c41b18dffc92020e0931ff95613f/compile-cmd