- I'm a Bioinformatician π¨βπ» working on genomic and metagenomic data.
- Phd: Applied a genome-wide association study to idetentify host-associated genomic determinants of E. coli (~1200 genomes) at RKI, Berlin. Link to disseration
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Quadram Institute Bioscience
- Norwich, UK
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00:27
(UTC +01:00) - @skt_genomics
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Scripts
Scripts PublicDevelopment of different scripts or programe in different programming langauage. Mainly perl, python and R
Perl
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quadram-institute-bioscience/galaxy-tools
quadram-institute-bioscience/galaxy-tools PublicA collection of bioinformatics tools for use with galaxy written at Quadram Institute
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singularity-rebuilt-nfcore
singularity-rebuilt-nfcore PublicA bash script to rebuilt the singularity images for nf-core pipelines.
Shell
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quadram-institute-bioscience/gmh-meta-its-profiling
quadram-institute-bioscience/gmh-meta-its-profiling PublicWhole Metagenome Shotgun and ITS amplicon sequencing methods
Python
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bash-scripts
bash-scripts PublicRepository of bash scripts to run the bioinformatic tools/pipelines
Shell 1
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