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Looks like a pretty complicated install with various python C/C++ dependencies as well as bioinfo tools like samtools. I would probably go with the micromamba route and install things via micromamba/conda
The text was updated successfully, but these errors were encountered:
What tool are you looking for and why?
https://github.com/HKU-BAL/Clair3
variant caller for nanopore data. They provide a dockerfile and pre-built images on dockerhub but may be useful to add our own dockerfile here.
dockerfile for reference: https://github.com/HKU-BAL/Clair3/blob/main/Dockerfile
Looks like a pretty complicated install with various python C/C++ dependencies as well as bioinfo tools like
samtools
. I would probably go with themicromamba
route and install things via micromamba/condaThe text was updated successfully, but these errors were encountered: