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One mode ellipsoid #1158

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One mode ellipsoid #1158

wants to merge 11 commits into from

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jadie1
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@jadie1 jadie1 commented Mar 16, 2021

This PR changes all ellipsoid examples to use new ellipsoid data generated via the shape cohort generator which only varies along the x radius. Addresses issue #1133

Testing required:

  • ellipsoid use case
  • ellipsoid_fd use case
  • ellipsoid_mesh use case
  • ellipsoid_cut use case
  • getting-started-with-segmentations.ipynb
  • getting-started-with-meshes.ipynb
  • getting-started-with-exploring-segmentations.ipynb
  • getting-started-with-grooming-segmentations.ipynb
  • getting-started-with-shape-cohort-generation.ipynb

When the new data on the portal (ellipsoid_1mode and ellipsoid_1mode_aligned) have the expected output from all use cases except ellipsoid_cut (PR #1157)

@sheryjoe
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related to #1082?

@jadie1
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jadie1 commented Mar 16, 2021

related to #1082?

Yes fixes #1082

@akenmorris
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Trying to figure out why a 100mb zip file was committed to this branch instead of git-lfs. You don't have git-lfs installed?

@akenmorris
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See #1162 for PR without large file.

@akenmorris akenmorris closed this Mar 18, 2021
@jadie1 jadie1 deleted the one_mode_ellipsoid branch January 10, 2022 20:54
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4 participants