Popular repositories

1. Migratory-shorebird-microbiota Migratory-shorebird-microbiota Public

   Data and analysis to go with our article "Gut microbiota of a long-distance migrant demonstrates resistance against environmental microbe incursions" MOLECULAR ECOLOGY 2017

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2. Infection-and-Migration-metaanalysis Infection-and-Migration-metaanalysis Public

   Data and analysis for our article "How does infection alter animal migration? A meta-analysis across experiemntal and observational studies" J. ANIMAL ECOLOGY 2017

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3. Mockingbird-Microbiome-Phylosymbiosis-Project Mockingbird-Microbiome-Phylosymbiosis-Project Public

   Data and code for our paper "Mechanisms governing avian phylosymbiosis". ECOLOGY AND EVOLUTION 2020

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4. Microbiome-analysis-examples Microbiome-analysis-examples Public

   I'm trying to organize my code for various microbiome analyses, so I can pass it on to my students. I include some example data and the R code to generate nice plots for various types of analyses. …

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5. Prevalence-Thresholds-Metaanalysis Prevalence-Thresholds-Metaanalysis Public

   Data and code for manuscript 'Phylogeny- and abundance- based metrics allow for the consistent comparison of core gut microbiome diversity indices across host species'. FRONTIERS IN MICROBIOLOGY 2021

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6. Migration-shorebird-physiology Migration-shorebird-physiology Public

   Data and code to go with the manuscript "Active migration is associated with specific and consistent changes to gut microbiota in shorebirds" J. ANIMAL ECOLOGY 2017

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