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@RasmussenLab

RasmussenLab

The Rasmussen group focuses on proteome and genome variation, coding variation and deep learning for integration of genomics, proteomics and clinical data.

Popular repositories

  1. vamb vamb Public

    Variational autoencoder for metagenomic binning

    Python 226 41

  2. MOVE MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    Jupyter Notebook 56 22

  3. phamb phamb Public

    Downstream processing of VAMB binning for Viral Elucidation

    Python 41 7

  4. pimms pimms Public

    Imputing proteomics data using deep learning models

    Jupyter Notebook 10

  5. vCentenarian vCentenarian Public

    Repository with supporting code and information for virome analysis of Centenarian metagenomes

    Python 3 3

  6. IntroToML IntroToML Public

    Forked from Center-for-Health-Data-Science/IntroToML

    Machine Learning course at Copenhagen University, Faculty of Health and Medical Sciences, Center for Health Data Science

    Jupyter Notebook 3

Repositories

Showing 10 of 31 repositories
  • pimms Public

    Imputing proteomics data using deep learning models

    Jupyter Notebook 10 GPL-3.0 0 15 1 Updated May 9, 2024
  • vamb Public

    Variational autoencoder for metagenomic binning

    Python 226 MIT 41 29 10 Updated May 8, 2024
  • MOVE Public

    MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations

    Jupyter Notebook 56 MIT 22 7 4 Updated May 3, 2024
  • cr2_usage_bot Public

    Send cr2 usage on computerome to a Slack channel.

    Python 0 0 0 0 Updated May 3, 2024
  • njab Public

    Not just another biomarkers: Functionality for biomarker discovery

    Python 0 MIT 1 0 1 Updated May 2, 2024
  • list_your_publications Public

    Query your list of publications using ORCID and DOI APIs

    Python 0 MIT 0 0 0 Updated Apr 27, 2024
  • thesis_template_sund Public

    PhD thesis template using styling from the faculty of health and medical sciences (short SUND in Danish)

    TeX 0 0 0 0 Updated Mar 23, 2024
  • python_package Public template

    Example Python package

    Python 1 MIT 0 0 0 Updated Feb 28, 2024
  • hela_qc_mnt_data Public

    Functionality for processing and analysing HeLa data quality control (QC) and maintenance (MNT) samples processed by MaxQuant

    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Jan 29, 2024
  • EIR Public Forked from arnor-sigurdsson/EIR

    A toolkit for training deep learning models on genotype, tabular, sequence, image, array and binary data.

    Python 1 AGPL-3.0 4 0 0 Updated Jan 19, 2024
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