You can install the released version of mycolorsTB from GitHub with:
install.packages("devtools")
devtools::install_github("PathoGenOmics-Lab/mycolorsTB")show(mycolorsTB::mycolors) #vector with lineage names
show(mycolorsTB::classicTB) #vector witout lineage names
library(ggplot2)
library(mycolorsTB)
# Example data
data <- data.frame(
x = 1:14,
y = rnorm(14),
group = rep(c(paste0("A", 1:4), paste0("L", 1:10)), each = 1)
)
# Fill: Plot with mycolors lineages names
ggplot(data, aes(x = x, y = y, fill = group)) +
geom_bar(stat = "identity") +
scale_fill_mycolors() + # scale_fill_manual(values = mycolors)
theme_minimal()
- A1:
#d1ae00 - A2:
#8ef5c8 - A3:
#73c2ff - A4:
#ff9cdb - L1:
#ff3091 - L2:
#001aff - L3:
#8a0bd2 - L4:
#ff0000 - L5:
#995200 - L6:
#1eb040 - L7:
#fbff00 - L8:
#ff9d00 - L9:
#37ff30 - L10:
#8fbda1