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Wageningen UR Plant Breeding

Wageningen UR Plant Breeding

Popular repositories

  1. pedigreeSim pedigreeSim Public

    PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of either diploid or tetraploid individuals. PedigreeSim can s…

    Java 13 2

  2. QTM QTM Public

    QTLTableMiner++ tool for mining tables in scientific articles

    Java 4 6

  3. Pedimap Pedimap Public

    Pedimap: software for the visualization of genetic and phenotypic data in pedigrees

    C++ 4 1

  4. MySQLdbCompare MySQLdbCompare Public

    Compare copies of MySQL db schemas

    3

  5. chebi2gene chebi2gene Public

    Python 3

  6. jChebi2gene jChebi2gene Public

    Java library to automatically link a chebi compound/identifier to a metabolic pathway or genes from the tomato genome.

    Java 3

Repositories

Showing 10 of 30 repositories
  • FAIR_CxE Public

    Supporting information for the Manuscript: TITLE

    HTML 0 GPL-3.0 0 0 0 Updated May 5, 2023
  • coreCollection Public

    coreCollection

    R 0 0 0 0 Updated Dec 20, 2022
  • QTM Public

    QTLTableMiner++ tool for mining tables in scientific articles

    Java 4 Apache-2.0 6 2 3 Updated May 20, 2022
  • CoSSA Public

    Comparative Subsequence Sets Analysis (CoSSA) workflows to identify haplotype specific SNPs linked to a trait of interest from Whole Genome Sequencing data

    Shell 0 1 0 0 Updated Jan 13, 2022
  • elixir-fondue-datathon Public

    ELIXIR FONDUE Datathon

    Jupyter Notebook 2 0 1 0 Updated Oct 1, 2021
  • pedigreeSim Public

    PedigreeSim is software that generates simulated genetic marker data of individuals in pedigreed populations. A population can consist of either diploid or tetraploid individuals. PedigreeSim can simulate meioses with or without chiasma interference, and in tetraploids it can simulate meioses with two bivalents or one quadrivalent per set of hom…

    Java 13 2 1 0 Updated Apr 13, 2021
  • Pedimap Public

    Pedimap: software for the visualization of genetic and phenotypic data in pedigrees

    C++ 4 1 0 0 Updated Feb 4, 2021
  • PediHaplotyper Public

    PediHaplotyper: software for consistent assignment of marker haplotypes in pedigrees

    R 2 0 0 0 Updated Feb 2, 2021
  • WatsonPotato Public

    Additional material for the article: Extracting knowledge networks from plant scientific literature: Potato tuber flesh color as an exemplary trait.

    Python 0 GPL-3.0 1 0 0 Updated Sep 16, 2020
  • Extracting_knowledge_networks_from_literature-Scripts_for_Watson_potato Public

    Scripts used for the work described in the manuscript

    Python 0 GPL-3.0 0 0 0 Updated Nov 20, 2019
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