NcHIPert Reformulation (#95)

* Removed old singularity code from CSQ1D. Working version of vexp_bounce.ipynb.
* Removing old singularity interface (deprecated).
* Updated perturbations to use CSQ1D instead of the old and deprecated HOAA.
* Simplified CSQ1D interface. Now the subclasses are responsible for any extra parameter of the system.
* Redesigned CSQ1D to better organize the output in terms of different parametrizations and frames.
* Updated nc_de_cont, vacuum_study.ipynb and test_py_csq1d.py to use the new design.
* Updated stubs.
* New method to compute the state at a time and frame.
* Updated vacuum_study_adiabatic.
* Updated vacuum_study.
* Updated unit testing.
* Added tests for non adiabatic vacuum and its propagation using ODE and the propagator.
* More tests for NcmCSQ1D and NcmCSQ1DState.
* Cleaning notebooks.
* Added electromagnetic constants to NcmC. Added unit testing.
* New NcHIPertEM for free electromagnetic field computation.
* Improved interface for perturbation objects (work in progress).
* Updated vexp_bounce.ipynb to use the new interface.
* Updating primordial_perturbations/magnetic_dust_bounce.ipynb.

---------

Co-authored-by: EFrion <frion.emmanuel@hotmail.fr>
Co-authored-by: Eduardo Barroso <eduardojsbarroso@gmail.com>

docs/numcosmo-docs.sgml

@@ -77,9 +77,10 @@
     <section>
       <title>Power spectrum functions</title>
       <xi:include href="xml/ncm_powspec.xml"/>
+      <xi:include href="xml/ncm_powspec_corr3d.xml"/>
       <xi:include href="xml/ncm_powspec_filter.xml"/>
       <xi:include href="xml/ncm_powspec_sphere_proj.xml"/>
-      <xi:include href="xml/ncm_powspec_corr3d.xml"/>
+      <xi:include href="xml/ncm_powspec_spline2d.xml"/>
     </section>
     <section>
       <title>Harmonic Oscillator</title>
@@ -271,14 +272,15 @@
   <chapter>
     <title>Perturbations</title>
     <xi:include href="xml/nc_hipert.xml"/>
-    <xi:include href="xml/nc_hipert_bg_var.xml"/>
-    <xi:include href="xml/nc_hipert_wkb.xml"/>
     <xi:include href="xml/nc_hipert_adiab.xml"/>
-    <xi:include href="xml/nc_hipert_gw.xml"/>
-    <xi:include href="xml/nc_hipert_two_fluids.xml"/>
-    <xi:include href="xml/nc_hipert_boltzmann.xml"/>
+    <xi:include href="xml/nc_hipert_bg_var.xml"/>
     <xi:include href="xml/nc_hipert_boltzmann_std.xml"/>
+    <xi:include href="xml/nc_hipert_boltzmann.xml"/>
+    <xi:include href="xml/nc_hipert_em.xml"/>
     <xi:include href="xml/nc_hipert_first_order.xml"/>
+    <xi:include href="xml/nc_hipert_gw.xml"/>
+    <xi:include href="xml/nc_hipert_two_fluids.xml"/>
+    <xi:include href="xml/nc_hipert_wkb.xml"/>
     <section>
       <title>Gravitational theories</title>
       <xi:include href="xml/nc_hipert_grav.xml"/>
@@ -320,9 +322,9 @@
     <section>
       <title>Matter Power Spectrum</title>
       <xi:include href="xml/nc_powspec_ml.xml"/>
-      <xi:include href="xml/nc_powspec_ml_fix_spline.xml"/>
-      <xi:include href="xml/nc_powspec_ml_transfer.xml"/>
       <xi:include href="xml/nc_powspec_ml_cbe.xml"/>
+      <xi:include href="xml/nc_powspec_ml_spline.xml"/>
+      <xi:include href="xml/nc_powspec_ml_transfer.xml"/>
       <xi:include href="xml/nc_powspec_mnl.xml"/>
       <xi:include href="xml/nc_powspec_mnl_halofit.xml"/>
     </section>